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ALive-research / Slicer-Liver

3D Slicer extension for liver analysis and therapy planning
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Slicer vmtk extension broken on macOS #153

Closed gatangen closed 1 year ago

gatangen commented 1 year ago

Describe the bug Slicer-Liver uses the vmtk extension to extract centrelines from the segmented models. When using this functionality, the error "vmtk library not found" is displayed and no centrelines are generated.

To Reproduce Steps to reproduce the behavior:

  1. Build latest SlicerPreview with vmtk extension
  2. Build latest Slicer-Liver extension
  3. Slicer-Liver - mark points in vessel - press button "Add Vessel Centerline"

Expected behavior A centerline connecting the marked points should be generated.

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Desktop (please complete the following information):

Additional context May be related to #151

gatangen commented 1 year ago

All the automatic tests for SlicerPreview are failing for Slicer vmtk extension on macOS. The test server is also running an old macOS version (10.13). https://slicer.cdash.org/index.php?project=SlicerPreview&begin=2022-09-12&end=2022-09-21&filtercount=1&showfilters=1&field1=buildname&compare1=63&value1=VMTK

RafaelPalomar commented 1 year ago

I think this is happening in other systems too. And a solution is on its way: https://github.com/vmtk/vmtk/pull/438 @gatangen @dalbenzioG