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AMICI-dev / AMICI

Advanced Multilanguage Interface to CVODES and IDAS
https://amici.readthedocs.io/
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Remove wurlitzer dependency #2423

Closed dweindl closed 5 months ago

dweindl commented 5 months ago

When using the Python interface, we don't rely on C(++) output anywhere anymore, and thus, we don't need wurlitzer anymore.

Closes #2409

socket-security[bot] commented 5 months ago

New and removed dependencies detected. Learn more about Socket for GitHub ↗︎

Package New capabilities Transitives Size Publisher

🚮 Removed packages: pypi/wurlitzer@3.1.0, pypi/wurlitzer@3.1.0

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codecov[bot] commented 5 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 77.59%. Comparing base (8c3b59a) to head (34aeadf).

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/graphs/tree.svg?width=650&height=150&src=pr&token=1bt9lbspzk&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev)](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) ```diff @@ Coverage Diff @@ ## develop #2423 +/- ## =========================================== - Coverage 77.60% 77.59% -0.02% =========================================== Files 324 324 Lines 20913 20902 -11 Branches 1464 1464 =========================================== - Hits 16230 16219 -11 Misses 4680 4680 Partials 3 3 ``` | [Flag](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | Coverage Δ | | |---|---|---| | [cpp](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | `73.37% <100.00%> (-0.02%)` | :arrow_down: | | [cpp_python](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | `34.10% <100.00%> (-0.03%)` | :arrow_down: | | [petab](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | `36.67% <100.00%> (-0.03%)` | :arrow_down: | | [python](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | `72.13% <100.00%> (-0.01%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev#carryforward-flags-in-the-pull-request-comment) to find out more. | [Files](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev) | Coverage Δ | | |---|---|---| | [python/sdist/amici/swig\_wrappers.py](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423?src=pr&el=tree&filepath=python%2Fsdist%2Famici%2Fswig_wrappers.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev#diff-cHl0aG9uL3NkaXN0L2FtaWNpL3N3aWdfd3JhcHBlcnMucHk=) | `96.36% <100.00%> (+3.93%)` | :arrow_up: | ... and [3 files with indirect coverage changes](https://app.codecov.io/gh/AMICI-dev/AMICI/pull/2423/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=AMICI-dev)