AMP-SCZ / utility

Storehouse for all utility scripts
Apache License 2.0
0 stars 4 forks source link

medhi01 contains only medication code and not name #122

Open tashrifbillah opened 4 months ago

tashrifbillah commented 4 months ago

We need to supply full medication names:

https://github.com/AMP-SCZ/utility/blob/5d362d9afe3c76e38af08c6e0148464090c4ae0c/nda-transform/medhi01.py#L86

tashrifbillah commented 4 months ago

This is the REDCap mapping:

714, acetyl-L-carnitine/ALC/carnitine_VITAMIN/SUPPLEMENT_714 712, alpha lipoic acid/lipoic acid_VITAMIN/SUPPLEMENT_712 286, alprazolam/Xanax_BENZODIAZEPINE_286 448, alprazolam/Xanax XL_BENZODIAZEPINE_448 18, amantadine/Symmetrel_OTHER_18 705, amino acids/branched-chain amino acids_VITAMIN/SUPPLEMENT_705 238, amisulpride/Solian_ANTIPSYCHOTIC_238 20, amitriptyline/Elavil/Endep_ANTIDEPRESSANT_20 110, amitriptyline perphenazine/Etrafon/Etrafon Forte/Triavil_ANTIPSYCHOTIC_110 146, amitriptyline+ chlordiazepoxide/Limbitrol_ANTIDEPRESSANT_146 24, amobarbital/Amytal_OTHER_24 34, amoxapine/Asendin_ANTIDEPRESSANT_34 548, amoxicillin/Amoxil_ANTIBIOTIC_548 444, ANTIDEPRESSANT BUT NAME UNKNOWN_SPECIAL CODE_444 525, antihistamines: Benadryl Allergy Sinus, cetirizine/Zyrtec, Chlor-Trimeton, desloratadine/Clarinex, Dimetane, fexofenadine/Allegra, levocetirizine/Xyzal, loratadine/Claritin, Semprex-D, pseudoephedrine/Sudafed, Tavist, Tylenol Allergy Sinus, Zyytec-D_ALLERGY/COLD_525 715, antioxidant_VITAMIN/SUPPLEMENT_715 333, ANTIPSYCHOTIC BUT NAME UNKNOWN_SPECIAL CODE_333 305, aripiprazole/Abilify_ANTIPSYCHOTIC_305 725, aripiprazole/Abilify ACUTE INJECTION_ANTIPSYCHOTIC_725 547, aripiprazole LAI/Abilify Maintena_ANTIPSYCHOTIC_547 723, aripiprazole lauroxil LAI/Aristada_ANTIPSYCHOTIC_723 568, armodafanil/Nuvigil_MISC. PSYCHOTROPIC_568 530, asenapine/Saphris_ANTIPSYCHOTIC_530 729, asenapine patch/Secuado_ANTIPSYCHOTIC_729 501, Aspirin_NSAID/ANTIINFLAMMATORY_501 41, atenolol/Tenormin_OTHER_41 418, atomoxetine/Strattera_MISC. PSYCHOTROPIC_418 553, azithromycin/Zithromax/Z-Pack_ANTIBIOTIC_553 557, aztreonam/Azactam/Cayston_ANTIBIOTIC_557 601, benzphetamine/Didrex_DIET PILL_601 74, benztropine/Cogentin_OTHER_74 708, biotin/vitamin B7_VITAMIN/SUPPLEMENT_708 413, biperiden/Akineton_OTHER_413 48, birth control pills/patch_OTHER_48 456, brexanolone/Zulresso_ANTIDEPRESSANT_456 574, brexpiprazole/Rexulti_ANTIPSYCHOTIC_574 52, bupropion/Wellbutrin_ANTIDEPRESSANT_52 428, bupropion/Wellbutrin SR/Wellbutrin XL_ANTIDEPRESSANT_428 411, buspirone/Buspar_NONBENZO ANXIOLYTIC_411 56, butabarbital/Buticaps/Butisol_OTHER_56 521, calcium_VITAMIN/SUPPLEMENT_521 576, Cannabidiol_MISC. PSYCHOTROPIC_576 250, carbamazepine/Tegretol/Atretol/Carbatrol/Epitrol_MOOD STABILIZER_250 721, cariprazine/Vraylar_ANTIPSYCHOTIC_721 552, cefaclor/Ranicor_ANTIBIOTIC_552 550, cefadroxil/Duricef_ANTIBIOTIC_550 551, cefazolin/Ancef/Kefzol_ANTIBIOTIC_551 516, celecoxib/Celebrex_NSAID/ANTIINFLAMMATORY_516 66, chloral hydrate/Aquachloral/Noctec_OTHER_66 144, chlordiazepoxide/Librium/Libritabs_BENZODIAZEPINE_144 260, chlormezanone/Trancopal_OTHER_260 256, chlorpromazine/Thorazine_ANTIPSYCHOTIC_256 257, chlorpromazine/Thorazine ACUTE INJECTION_ANTIPSYCHOTIC_257 248, chlorprothixene/Taractan_ANTIPSYCHOTIC_248 303, citalopram/Celexa_ANTIDEPRESSANT_303 554, clarithromycin/Biaxin/Biaxin XL_ANTIBIOTIC_554 528, clobazam/Urbanol/Frisium_BENZODIAZEPINE_528 26, clomipramine/Anafranil_ANTIDEPRESSANT_26 68, clonazepam/Klonopin_BENZODIAZEPINE_68 62, clonidine/Catapres_MISC. PSYCHOTROPIC_62 264, clorazepate/Tranxene_BENZODIAZEPINE_264 69, clozapine/Clozaril_ANTIPSYCHOTIC_69 541, codeine_OTHER_541 606, conjugated linolenic acids/Tonalin_DIET PILL_606 524, corticosteroids: betamethasone/Celestone, Cortisone, dexamethasone/Dexamethasone Intensol/DexPak, methylprednisolone/Medrol, Depo-Medrol, Solu-Medrol, prednisolone/Orapred/Prelone, prednisone/Prednisone Intensol, triamcinolone/Aristospan Intra-articular/Aristospan Intralesional/Kenalog_STEROID_524 92, Deprol_OTHER_92 196, desipramine/Norpramin/Pertofrane_ANTIDEPRESSANT_196 543, desvenlafaxine/Pristiq_ANTIDEPRESSANT_543 434, dexmethylphenidate/Focalin_STIMULANT_434 401, dextroamphetamine/Dexedrine_STIMULANT_401 400, dextroamphetamine ++/Adderall ++_STIMULANT_400 276, diazepam/Valium_BENZODIAZEPINE_276 509, diclofenac/Voltaren_NSAID/ANTIINFLAMMATORY_509 604, diethylpropion/Tenuate_DIET PILL_604 503, diflunisal/Dolobid_OTHER_503 443, diltiazem/Cardizem/Cartia XT/Dilacor XR/Diltia XT/Tiamate/Tiazac_OTHER_443 46, diphenhydramine/Benadryl/Cope/Compoz/Nytol/Sleep Eze/Sominex/Nervine_ALLERGY/COLD_46 91, divalproex/Depakote_MOOD STABILIZER_91 446, divalproex/Depakote ER_MOOD STABILIZER_446 12, doxepin/Sinequan/Adapin_ANTIDEPRESSANT_12 563, doxycycline/Vibramycin_ANTIBIOTIC_563 403, droperidol/Inapsine_ANTIPSYCHOTIC_403 727, droperidol/Inapsine ACUTE INJECTION_ANTIPSYCHOTIC_727 539, D-serine or placebo (Blinded)_SPECIAL CODE_539 450, duloxetine/Cymbalta_ANTIDEPRESSANT_450 517, EPA_VITAMIN/SUPPLEMENT_517 518, EPA+DHA/fish oil/omega-3 fatty acids_VITAMIN/SUPPLEMENT_518 558, ertapenem/Invanz_ANTIBIOTIC_558 427, escitalopram oxalate/Lexapro_ANTIDEPRESSANT_427 457, esketamine/Spravato_ANTIDEPRESSANT_457 416, estazolam/ProSom_BENZODIAZEPINE_416 535, eszopiclone/Lunesta_BENZODIAZEPINE_535 218, ethchlorvynol/Placidyl_OTHER_218 513, etodolac/Lodine_NSAID/ANTIINFLAMMATORY_513 556, flumequine/Flubactin, telithromycin/Ketek_ANTIBIOTIC_556 566, flumequine/Flubactin_ANTIBIOTIC_566 116, fluoxetine/Prozac/Symbyax_ANTIDEPRESSANT_116 573, fluoxetine vs aripiprazole (Blinded)_SPECIAL CODE_573 220, fluphenazine/Prolixin/Permitil_ANTIPSYCHOTIC_220 222, fluphenazine LAI/Prolixin Decanoate_ANTIPSYCHOTIC_222 80, flurazepam/Dalmane_BENZODIAZEPINE_80 404, fluvoxamine/Luvox_ANTIDEPRESSANT_404 706, folate/folic acid_VITAMIN/SUPPLEMENT_706 307, gabapentin/Neurontin_NONBENZO ANXIOLYTIC_307 570, galantamine/Razadine_MISC. PSYCHOTROPIC_570 571, galantamine ER/Razadine ER_MISC. PSYCHOTROPIC_571 102, glutethimide/Doriden_OTHER_102 519, glycine_VITAMIN/SUPPLEMENT_519 447, guanfacine/Tenex_MISC. PSYCHOTROPIC_447 567, guanfacine extended release/Intuniv_MISC. PSYCHOTROPIC_567 419, halazepam/Paxipam_BENZODIAZEPINE_419 122, haloperidol/Haldol_ANTIPSYCHOTIC_122 123, haloperidol/Haldol ACUTE INJECTION_ANTIPSYCHOTIC_123 124, haloperidol LAI/Haldol Decanoate_ANTIPSYCHOTIC_124 607, Hoodia_DIET PILL_607 280, hydrocodone+ acetaminophen/Vicodin_OTHER_280 38, hydroxyzine/Atarax/Vistaril_ALLERGY/COLD_38 424, Hypericum perforatum/St. John's Wort/St. John's Grass/Klamath Weed_VITAMIN/SUPPLEMENT_424 504, ibuprofen/Advil/Motrin_NSAID/ANTIINFLAMMATORY_504 532, iloperidone/Fanapt_ANTIPSYCHOTIC_532 130, imipramine/Tofranil_ANTIDEPRESSANT_130 258, imipramine pamoate/Tofranil P.M._ANTIDEPRESSANT_258 510, indomethacin/Indocin_NSAID/ANTIINFLAMMATORY_510 156, isocarboxazid/Marplan_ANTIDEPRESSANT_156 526, isotretinoin/Accutane_OTHER_526 559, kanamycin/Kantrex_ANTIBIOTIC_559 505, ketoprofen/Orudis_NSAID/ANTIINFLAMMATORY_505 514, ketorolac/Toradol_NSAID/ANTIINFLAMMATORY_514 415, lamotrigine/Lamictal_MOOD STABILIZER_415 291, lemborexant/Davvigo_BENZODIAZEPINE_291 438, levetiracetam/Keppra_MISC. PSYCHOTROPIC_438 569, levomilnacipran/Fetzima_ANTIDEPRESSANT_569 422, levothyroxine sodium/Levotabs/Levothroid/Levoxyl/Synthroid/Unithyroid_OTHER_422 421, liothyronine sodium/Cytomel_OTHER_421 430, liotrix/Thyrolar_OTHER_430 537, lisdexamfetamine/Vyvanse_STIMULANT_537 106, lithium carbonate/Eskalith/Lithonate/Lithane/Lithobid_MOOD STABILIZER_106 40, lorazepam/Ativan_BENZODIAZEPINE_40 150, loxapine/Loxitane_ANTIPSYCHOTIC_150 151, loxapine/Loxitane ACUTE INJECTION_ANTIPSYCHOTIC_151 703, L-theanine/Theanine_VITAMIN/SUPPLEMENT_703 138, L-tryptophan_ANTIDEPRESSANT_138 728, lumateperone/Caplyta_ANTIPSYCHOTIC_728 540, lurasidone/Latuda_ANTIPSYCHOTIC_540 716, magnesium_VITAMIN/SUPPLEMENT_716 154, maprotiline/Ludiomil_ANTIDEPRESSANT_154 777, MEDICATION BUT NAME UNKNOWN_SPECIAL CODE_777 423, melatonin_VITAMIN/SUPPLEMENT_423 545, meloxicam/Mobic_NSAID/ANTIINFLAMMATORY_545 86, meperidine/Demerol_OTHER_86 160, meprobamate/Miltown/Equanil/Meprospan_OTHER_160 164, Meprotabs_OTHER_164 406, mesoridazine/Serentil_ANTIPSYCHOTIC_406 11, mesoridazine/Serentil ACUTE INJECTION_ANTIPSYCHOTIC_11 170, methadone/Dolophine_OTHER_170 436, methimazole/Tapazole_OTHER_436 405, methotrimeprazine/Levoprome_ANTIPSYCHOTIC_405 228, methylphenidate/Ritalin/Methylin_STIMULANT_228 453, methylphenidate patch/Daytrana_STIMULANT_453 426, methylphenidate XR/Concerta/Metadate/Biphentin_STIMULANT_426 192, methyprylon/Noludar_OTHER_192 148, metoprolol/Lopressor/Toprol_OTHER_148 718, mineral supplement_VITAMIN/SUPPLEMENT_718 562, minocycline/Minocin_ANTIBIOTIC_562 407, mirtazapine/Remeron_ANTIDEPRESSANT_407 437, modafinil/Provigil_MISC. PSYCHOTROPIC_437 178, molindone/Moban_ANTIPSYCHOTIC_178 555, MOOD STABILIZER BUT NAME UNKNOWN_SPECIAL CODE_555 180, morphine_OTHER_180 701, Multivitamin_VITAMIN/SUPPLEMENT_701 506, nabumetone/Relafen_NSAID/ANTIINFLAMMATORY_506 704, NAC/N-acetyl cysteine_VITAMIN/SUPPLEMENT_704 440, nadolol/Corgard_OTHER_440 508, naproxen/Aleve/Naprosyn_NSAID/ANTIINFLAMMATORY_508 306, nefazodone/Serzone_ANTIDEPRESSANT_306 560, neomycin/Mycifradin/Myciguent_ANTIBIOTIC_560 707, niacin/nicotinic acid/vitamin B3_VITAMIN/SUPPLEMENT_707 888, NO INFORMATION_SPECIAL CODE_888 999, NO MEDS_SPECIAL CODE_999 166, nomifensine/Merital_ANTIDEPRESSANT_166 204, nortriptyline/Aventyl/Pamelor_ANTIDEPRESSANT_204 201, olanzapine/Zyprexa/Symbyax/Lybalvi _ANTIPSYCHOTIC_201 726, olanzapine/Zyprexa ACUTE INJECTION_ANTIPSYCHOTIC_726 720, olanzapine LAI/Relprevv_ANTIPSYCHOTIC_720 542, omega-3 or placebo (Blinded)_SPECIAL CODE_542 529, opioids, opiates, or combination drugs like Percocet_OTHER_529 515, oxaprozin/Daypro_NSAID/ANTIINFLAMMATORY_515 234, oxazepam/Serax_BENZODIAZEPINE_234 414, oxcarbazepine/Trileptal_MOOD STABILIZER_414 527, oxycodone/Oxycontin_OTHER_527 531, paliperidone/Invega_ANTIPSYCHOTIC_531 546, paliperidone palmitate LAI/Invega Sustenna_ANTIPSYCHOTIC_546 722, paliperidone palmitate LAI/Invega Trinza_ANTIPSYCHOTIC_722 108, pargyline/Eutonyl_ANTIDEPRESSANT_108 207, paroxetine/Paxil_ANTIDEPRESSANT_207 445, paroxetine/Paxil CR_ANTIDEPRESSANT_445 429, pemoline/Cylert/PemADD_STIMULANT_429 549, penicillin/Pen-VK_ANTIBIOTIC_549 188, pentobarbital/Nembutal_OTHER_188 270, perphenazine/Trilafon_ANTIPSYCHOTIC_270 271, perphenazine/Trilafon ACUTE INJECTION_ANTIPSYCHOTIC_271 605, phendimetraine/Bontril_DIET PILL_605 182, phenelzine/Nardil_ANTIDEPRESSANT_182 216, phenobarbital/Bellatal/Solfoton_OTHER_216 603, phentermine/Adipex-P/Fastin_DIET PILL_603 98, phenytoin/Dilantin_OTHER_98 408, pimozide/Orap_ANTIPSYCHOTIC_408 441, pindolol/Visken_OTHER_441 507, piroxicam/Feldene_NSAID/ANTIINFLAMMATORY_507 454, pitolisant/Wakix_MISC. PSYCHOTROPIC_454 64, prazepam/Centrax_BENZODIAZEPINE_64 719, prazosin/Minipress_NONBENZO ANXIOLYTIC_719 575, pregabalin/Lyrica_NONBENZO ANXIOLYTIC_575 75, prochlorperazine/Compazine_ANTIPSYCHOTIC_75 76, prochlorperazine/Compazine ACUTE INJECTION_ANTIPSYCHOTIC_76 242, promazine/Sparine_ANTIPSYCHOTIC_242 82, propoxyphene/Darvon/Darvocet_OTHER_82 132, propranolol/Inderal_OTHER_132 435, propylthiouracil/PTU/Propylthiour_OTHER_435 284, protriptyline/Vivactil_ANTIDEPRESSANT_284 666, PSYCHOSTIMULANT BUT NAME UNKNOWN_SPECIAL CODE_666 420, quazepam/Doral_BENZODIAZEPINE_420 235, quetiapine/Seroquel_ANTIPSYCHOTIC_235 300, risperidone/Risperdal_ANTIPSYCHOTIC_300 425, risperidone LAI/Risperdal Consta_ANTIPSYCHOTIC_425 452, risperidone SC LAI/Perseris_ANTIPSYCHOTIC_452 561, rosoxacin/Eradacil_ANTIBIOTIC_561 502, salsalate/Amigesic_NSAID/ANTIINFLAMMATORY_502 232, secobarbital/Seconal/Tuinal_OTHER_232 402, selegiline/Atapryl/Carbex/Eldepryl_MISC. PSYCHOTROPIC_402 713, selenium_VITAMIN/SUPPLEMENT_713 409, sertindole/Serdolect_ANTIPSYCHOTIC_409 290, sertraline/Zoloft_ANTIDEPRESSANT_290 602, sibutramine/Meridia_DIET PILL_602 60, sodium pentobarbital/Carbrital_OTHER_60 455, solriamfetol/Sunosi_MISC. PSYCHOTROPIC_455 511, sulindac/Clinoril_NSAID/ANTIINFLAMMATORY_511 251, temazepam/Restoril_BENZODIAZEPINE_251 564, tetracycline/Sumycin_ANTIBIOTIC_564 158, thioridazine/Mellaril_ANTIPSYCHOTIC_158 184, thiothixene/Navane_ANTIPSYCHOTIC_184 431, thyroglobulin_OTHER_431 432, thyroid hormone/Armour thyroid/Thyroid strong/Thyrar/SPT_OTHER_432 449, tiagabine/Gabatril_NONBENZO ANXIOLYTIC_449 565, tigecycline/Tygacil_ANTIBIOTIC_565 442, timolol/Blocadren_OTHER_442 512, tolmetin/Tolectin_NSAID/ANTIINFLAMMATORY_512 433, topiramate/Topamax_MISC. PSYCHOTROPIC_433 206, tranylcypromine/Parnate_ANTIDEPRESSANT_206 266, trazodone/Desyrel_ANTIDEPRESSANT_266 120, triazolam/Halcion_BENZODIAZEPINE_120 244, trifluoperazine/Stelazine_ANTIPSYCHOTIC_244 245, trifluoperazine/Stelazine ACUTE INJECTION_ANTIPSYCHOTIC_245 410, triflupromazine/Vesprin_ANTIPSYCHOTIC_410 13, triflupromazine/Vesprin ACUTE INJECTION_ANTIPSYCHOTIC_13 32, trihexyphenidyl/Artane_OTHER_32 246, trimipramine/Surmontil_ANTIDEPRESSANT_246 272, tryptophan _VITAMIN/SUPPLEMENT_272 90, valproic acid/Depakene_MOOD STABILIZER_90 412, venlafaxine/Effexor_ANTIDEPRESSANT_412 439, venlafaxine/Effexor XR_ANTIDEPRESSANT_439 536, verapamil/Calan/Covera HS/Isoptin/Verelan _OTHER_536 544, vilazodone/Viibryd_ANTIDEPRESSANT_544 709, vitamin B complex_VITAMIN/SUPPLEMENT_709 711, vitamin C_VITAMIN/SUPPLEMENT_711 702, vitamin D_VITAMIN/SUPPLEMENT_702 710, vitamin E_VITAMIN/SUPPLEMENT_710 572, vortioxetine/Brintellix_ANTIDEPRESSANT_572 451, zaleplon/Sonata_BENZODIAZEPINE_451 717, zinc_VITAMIN/SUPPLEMENT_717 304, ziprasidone/Geodon_ANTIPSYCHOTIC_304 724, ziprasidone/Geodon ACUTE INJECTION_ANTIPSYCHOTIC_724 538, ziprasidone/Geodon or placebo (Blinded)_SPECIAL CODE_538 417, zolpidem/Ambien_BENZODIAZEPINE_417 533, zopiclone/Imovane_BENZODIAZEPINE_533 534, zopiclone/Zimovane_BENZODIAZEPINE_534 730, Masculinizing hormone treatment_730 731, Feminizing hormone treatment_731 732, Puberty blockers_732 577, Lybalvi/Samidorphan_577 292, Dardiorexant/Quviviq_292