AMPATH / openmrs-module-interop

The OpenMRS Interoperability Module with FHIR is an extension to the OpenMRS platform that allows it to integrate with other healthcare systems using the Fast Healthcare Interoperability Resources (FHIR) standard.
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Cannot compile the module #31

Open satyadeep-ih opened 1 year ago

satyadeep-ih commented 1 year ago

Hi @jecihjoy and @corneliouzbett,

I am trying to compile the module, but getting the error: Cannot invoke "com.thoughtworks.qdox.model.JavaModule.getDescriptor()" because the return value of "com.thoughtworks.qdox.JavaProjectBuilder.addSourceFolder(java.io.File)" is null

Output of mvn -X compile is as follows:

[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.10.1:compile (default-compile) on project interop-api: Execution default-compile of goal org.apache.maven.plugins:maven-compiler-plugin:3.10.1:compile failed.: NullPointerException -> [Help 1] org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:3.10.1:compile (default-compile) on project interop-api: Execution default-compile of goal org.apache.maven.plugins:maven-compiler-plugin:3.10.1:compile failed. at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute2 (MojoExecutor.java:347) at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute (MojoExecutor.java:330) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:175) at org.apache.maven.lifecycle.internal.MojoExecutor.access$000 (MojoExecutor.java:76) at org.apache.maven.lifecycle.internal.MojoExecutor$1.run (MojoExecutor.java:163) at org.apache.maven.plugin.DefaultMojosExecutionStrategy.execute (DefaultMojosExecutionStrategy.java:39) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:160) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:105) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:73) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:53) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:118) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:260) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:172) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:100) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:821) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:270) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at sun.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:498) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:282) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:225) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:406) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:347) Caused by: org.apache.maven.plugin.PluginExecutionException: Execution default-compile of goal org.apache.maven.plugins:maven-compiler-plugin:3.10.1:compile failed. at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:133) at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute2 (MojoExecutor.java:342) at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute (MojoExecutor.java:330) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:175) at org.apache.maven.lifecycle.internal.MojoExecutor.access$000 (MojoExecutor.java:76) at org.apache.maven.lifecycle.internal.MojoExecutor$1.run (MojoExecutor.java:163) at org.apache.maven.plugin.DefaultMojosExecutionStrategy.execute (DefaultMojosExecutionStrategy.java:39) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:160) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:105) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:73) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:53) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:118) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:260) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:172) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:100) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:821) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:270) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at sun.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:498) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:282) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:225) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:406) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:347) Caused by: java.lang.NullPointerException at org.codehaus.plexus.languages.java.jpms.SourceModuleInfoParser.fromSourcePath (SourceModuleInfoParser.java:52) at org.codehaus.plexus.languages.java.jpms.LocationManager.getMainModuleDescriptor (LocationManager.java:334) at org.codehaus.plexus.languages.java.jpms.LocationManager.resolvePaths (LocationManager.java:155) at org.apache.maven.plugin.compiler.CompilerMojo.preparePaths (CompilerMojo.java:250) at org.apache.maven.plugin.compiler.AbstractCompilerMojo.execute (AbstractCompilerMojo.java:864) at org.apache.maven.plugin.compiler.CompilerMojo.execute (CompilerMojo.java:198) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:126) at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute2 (MojoExecutor.java:342) at org.apache.maven.lifecycle.internal.MojoExecutor.doExecute (MojoExecutor.java:330) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:175) at org.apache.maven.lifecycle.internal.MojoExecutor.access$000 (MojoExecutor.java:76) at org.apache.maven.lifecycle.internal.MojoExecutor$1.run (MojoExecutor.java:163) at org.apache.maven.plugin.DefaultMojosExecutionStrategy.execute (DefaultMojosExecutionStrategy.java:39) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:160) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:105) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:73) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:53) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:118) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:260) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:172) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:100) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:821) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:270) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at sun.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:498) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:282) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:225) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:406) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:347) [ERROR] [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/PluginExecutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <args> -rf :interop-api [DEBUG] Shutting down adapter factory; available factories [file-lock, rwlock-local, semaphore-local, noop]; available name mappers [discriminating, file-gav, file-hgav, gav, static] [DEBUG] Shutting down 'file-lock' factory [DEBUG] Shutting down 'rwlock-local' factory [DEBUG] Shutting down 'semaphore-local' factory [DEBUG] Shutting down 'noop' factory

Any help will be greatly appreciated.

Thanks

corneliouzbett commented 11 months ago

@satyadeep-ih can you share environment details:

satyadeep-ih commented 11 months ago

Hi,

Java version 1.8

Maven 3

Thanks

On Tue, 28 Nov, 2023, 8:49 pm Kipchumba Bett, @.***> wrote:

@satyadeep-ih https://github.com/satyadeep-ih can you share environment details:

  • Maven version: ?
  • Java version: ?

— Reply to this email directly, view it on GitHub https://github.com/AMPATH/openmrs-module-interop/issues/31#issuecomment-1830059056, or unsubscribe https://github.com/notifications/unsubscribe-auth/ARZURDVWFBNFCF5IC6UIEL3YGX6JJAVCNFSM6AAAAAA6GJPR6GVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTQMZQGA2TSMBVGY . You are receiving this because you were mentioned.Message ID: @.***>

corneliouzbett commented 11 months ago

Hi, Java version 1.8 Maven 3

Be specific maven 3.? AFAIK this project isn't compatible with the latest version of maven. You try compiling with maven <3.8.x

satyadeep-ih commented 11 months ago

Hi @corneliouzbett , It is 3.9.2 , I will try with maven 3.6.x Thanks

satyadeep-ih commented 11 months ago

getting this on maven 3.6.3:

Artifact has not been packaged yet. When used on reactor artifact, unpack should be executed after packaging: see MDEP-98.

@corneliouzbett any idea on this?