Updates for PelePhysics reorganization.

AMReX-Combustion / PeleLMeX

An adaptive mesh hydrodynamics simulation code for low Mach number reacting flows without level sub-cycling.

https://amrex-combustion.github.io/PeleLMeX/

BSD 3-Clause "New" or "Revised" License

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Updates for PelePhysics reorganization. #325

Closed baperry2 closed 6 months ago

baperry2 commented 6 months ago

Takes into account changes in https://github.com/AMReX-Combustion/PelePhysics/pull/452

AMReX and Sundials move to Submodules of PelePhysics. PeleMP moves to be part of PelePhysics.

Mostly, this PR just updates the build system and CI to make sure everything points to the right place for this reorganization. The CMake build for soot is untested until the soot cases are moved from PeleMP.