stnava
commented
4 years ago the MNI image is from Mindboggle. recent discussion here:
https://www.biorxiv.org/content/10.1101/2019.12.19.883330v1.full.pdf
mnia is AAL labels https://en.wikipedia.org/wiki/Automated_Anatomical_Labeling
mnib is Brodmann labels
more on all this here https://people.cas.sc.edu/rorden/mricro/lesion.html#brod
I'd like to use getTemplateCoordinates to assign coordinates to some data for a publication. Where can I get info on what getTemplateCoordinates is doing, and how mnia and mnib were created. I assume that getTemplateCoordinates takes my stat image, registers mni to it, then uses the mapping to assess where my stat blobs (I created with labelClusters) fall into mnia and mnib? I take it (but want to be sure) that even though my stats image and mni have very different values, that ANTsR registration does the right thing? Any details appreciated!