ANTsX / ITKR

port of ITK to R
6 stars 14 forks source link

I have issue to install your package #11

Closed billchenxi closed 5 years ago

billchenxi commented 7 years ago

devtools::install_github( "stnava/ITKR" ) Downloading GitHub repo stnava/ITKR@master from URL https://api.github.com/repos/stnava/ITKR/zipball/master Installing ITKR '/Library/Frameworks/R.framework/Resources/bin/R' CMD INSTALL '/private/var/folders/96/7b7c46zx7v1fqqrsmw_0btx40000gn/T/Rtmpc0c6ZL/devtools1055e4944128f/stnava-ITKR-8d84bf1' Your branch is up-to-date with 'origin/master'. Installation failed: Command failed: '/Library/Frameworks/R.framework/Resources/bin/R' CMD INSTALL '/private/var/folders/96/7b7c46zx7v1fqqrsmw_0btx40000gn/T/Rtmpc0c6ZL/devtools1055e4944128f/stnava-ITKR-8d84bf1'

  • installing to library ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library’
  • installing source package ‘ITKR’ ... Cloning into 'itks'... Checking out files: 100% (15235/15235), done. Already on 'master' Note: checking out '2714cc1805f50504f5b9a60d0f62ffec8e73989'.

You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example:

git checkout -b

HEAD is now at 2714cc1... Merge topic 'setupForDevelopment-absolute-path' ./configure: line 26: cmake: command not found ERROR: configuration failed for package ‘ITKR’

billchenxi commented 7 years ago

Also the tools and methods packages are not available for R 3.2, are they needed for the instllation? If so, can you help me to find them? Thanks,

sremedios commented 7 years ago

I'm having the same problem as billchenxi. Is there a workaround for this issue yet?

stnava commented 7 years ago

install cmake or cmaker.

see install instructions here:

https://github.com/stnava/ANTsR/

brian

On Sun, May 14, 2017 at 4:45 PM, Samuel Remedios notifications@github.com wrote:

I'm having the same problem as billchenxi. Is there a workaround for this issue yet?

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/stnava/ITKR/issues/11#issuecomment-301338734, or mute the thread https://github.com/notifications/unsubscribe-auth/AATyfsGxe7ghdfHu7dxYBlQTbM1Wx6KPks5r52fjgaJpZM4LlJml .

sremedios commented 7 years ago

Wow, I don't know how I didn't realize I was just missing cmake. Thanks for the quick response; fixed the issue effortlessly with that.

muschellij2 commented 6 years ago

@stnava Can be closed.