Closed Kamran-Afzali closed 5 years ago
Install git and try again but you might want to go for a Linux system .
On Fri, Feb 2, 2018 at 4:07 PM Kamran-Afzali notifications@github.com wrote:
Your help is much appreciated. cmaker is already installed.
devtools::install_github("stnava/ITKR") Downloading GitHub repo stnava/ITKR@master from URL https://api.github.com/repos/stnava/ITKR/zipball/master Installing ITKR "C:/PROGRA1/R/R-341.2/bin/x64/R" --no-site-file --no-environ --no-save --no-restore --quiet CMD INSTALL "C:/Users/afzmoh00.SAINTE-JUSTINE/AppData/Local/Temp/Rtmpe8Jvbt/devtools1aa05c753f4b/stnava-ITKR-18ce45b"
--library="C:/Program Files/R/R-3.4.2/library" --install-tests
** installing source* package 'ITKR' ...
git: not found git: not found git: not found
CMake Error: The source directory "C:/Users/afzmoh00.SAINTE-JUSTINE/AppData/Local/Temp/Rtmpe8Jvbt/devtools1aa05c753f4b/stnava-ITKR-18ce45b/src/itks" does not appear to contain CMakeLists.txt. Specify --help for usage, or press the help button on the CMake GUI. libs Warning: this package has a non-empty 'configure.win' file, so building only the main architecture
C:/RBuildTools/3.4/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA1/R/R-341.2/include" -DNDEBUG -I"C:/Program Files/R/R-3.4.2/library/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c dummy.cpp -o dummy.o cd itkb && mingw32-make -j 2 && mingw32-make install && rm -rf ../itks && rm -rf CMakeFiles/ && rm -rf Modules/ && rm -rf CMakeTmp/ rm -f Makefile rm -rf Utilities/Doxygen mingw32-make: not found make: *** [libs] Error 127 Warning: l'exécution de la commande 'make -f "Makevars.win" -f "C:/PROGRA 1/R/R-341.2/etc/x64/Makeconf" -f "C:/PROGRA1/R/R-341.2/share/make/ winshlib.mk" CXX='$(CXX11) $(CXX11STD)' CXXFLAGS='$(CXX11FLAGS)' CXXPICFLAGS='$(CXX11PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX11LDFLAGS)' SHLIB_LD='$(SHLIB_CXX11LD)' SHLIB="ITKR.dll" WIN=64 TCLBIN=64 OBJECTS="dummy.o"' renvoie un statut 2 ERROR: compilation failed for package 'ITKR'
- removing 'C:/Program Files/R/R-3.4.2/library/ITKR' Installation failed: Command failed (1)
— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/stnava/ITKR/issues/18, or mute the thread https://github.com/notifications/unsubscribe-auth/AATyfrNYAVeSgSDGtN7LQj_VRJCzQfCnks5tQ3kogaJpZM4R3x4v .
--
brian
This is the hospital computer and I cant change the io, could you please explain what might be the reason?
Install git. It’s a program.
On Fri, Feb 2, 2018 at 4:22 PM Kamran-Afzali notifications@github.com wrote:
This is the hospital computer and I cant change the io, could you please explain what might be the reason?
— You are receiving this because you commented.
Reply to this email directly, view it on GitHub https://github.com/stnava/ITKR/issues/18#issuecomment-362711546, or mute the thread https://github.com/notifications/unsubscribe-auth/AATyfr8Ok-p1F7LNiXp9TYh6mvZnvIZlks5tQ3yggaJpZM4R3x4v .
--
brian
You will give your mental health a big service if you try working on an unrestricted computer first (I am also a in a securely controlled IT environment in hospital setting). And if windows is a must, try windows 10 and Linux subsystem.
Sent from Mailhttps://go.microsoft.com/fwlink/?LinkId=550986 for Windows 10
From: Kamran-Afzalimailto:notifications@github.com Sent: Friday, February 2, 2018 1:22 PM To: stnava/ITKRmailto:ITKR@noreply.github.com Cc: Subscribedmailto:subscribed@noreply.github.com Subject: Re: [stnava/ITKR] Installation problems (#18)
This is the hospital computer and I cant change the io, could you please explain what might be the reason?
— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHubhttps://nam03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fstnava%2FITKR%2Fissues%2F18%23issuecomment-362711546&data=02%7C01%7C%7C62d7724e703942c0c6fc08d56a83184f%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C636532033624696480&sdata=hxfE6QxfU1YkiMEpQygDFqG%2BKPXG8M8j%2Brhy6JJg8b4%3D&reserved=0, or mute the threadhttps://nam03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAUTJFLtM4EBm1erc501FGrgBlDHQOca3ks5tQ3yggaJpZM4R3x4v&data=02%7C01%7C%7C62d7724e703942c0c6fc08d56a83184f%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C636532033624696480&sdata=Rh08OwtDBoIxrwbARFe6FC8k3IemmNgYBDjHHHHIbH8%3D&reserved=0.
Your help is much appreciated. cmaker is already installed.
** installing source* package 'ITKR' ...
git: not found git: not found git: not found
CMake Error: The source directory "C:/Users/afzmoh00.SAINTE-JUSTINE/AppData/Local/Temp/Rtmpe8Jvbt/devtools1aa05c753f4b/stnava-ITKR-18ce45b/src/itks" does not appear to contain CMakeLists.txt. Specify --help for usage, or press the help button on the CMake GUI. libs Warning: this package has a non-empty 'configure.win' file, so building only the main architecture
C:/RBuildTools/3.4/mingw_64/bin/g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-34~1.2/include" -DNDEBUG -I"C:/Program Files/R/R-3.4.2/library/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c dummy.cpp -o dummy.o cd itkb && mingw32-make -j 2 && \ mingw32-make install && rm -rf ../itks && \ rm -rf CMakeFiles/ && rm -rf Modules/ && rm -rf CMakeTmp/ \ rm -f Makefile rm -rf Utilities/Doxygen mingw32-make: not found make: *** [libs] Error 127 Warning: l'exécution de la commande 'make -f "Makevars.win" -f "C:/PROGRA~1/R/R-34~1.2/etc/x64/Makeconf" -f "C:/PROGRA~1/R/R-34~1.2/share/make/winshlib.mk" CXX='$(CXX11) $(CXX11STD)' CXXFLAGS='$(CXX11FLAGS)' CXXPICFLAGS='$(CXX11PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX11LDFLAGS)' SHLIB_LD='$(SHLIB_CXX11LD)' SHLIB="ITKR.dll" WIN=64 TCLBIN=64 OBJECTS="dummy.o"' renvoie un statut 2 ERROR: compilation failed for package 'ITKR'