ITK-4.11 or ITK-4.9?

[agt24]

I'm having some trouble installing ANTsR with the recommended devtools command: (devtools::install_github( "stnava/ANTsR" )

The configure script appears to run ITKR::itkVersion() to find the ITK include directories. It returns 4.11, but all of the files the ITKR installation (which occurred immediately before) are labelled ITK-4.9:

> ITKR::itkIncludes()
[1] "itkIncludes: itk includes do not exist"
/home/adamt/R/x86_64-pc-linux-gnu-library/3.3/ITKR/libs/include/ITK-4.11/> ITKR::itkVersion()
[1] "4.11"
> system("ls /home/adamt/R/x86_64-pc-linux-gnu-library/3.3/ITKR/libs/include/")
ITK-4.9
> 

Any ideas on the cause of the mismatch?

[stnava]

this is a bug.

brian

On Wed, Jul 20, 2016 at 2:38 PM, Adam Thomas notifications@github.com wrote:

I'm having some trouble installing ANTsR with the recommended devtools command: (devtools::install_github( "stnava/ANTsR" )

The confirgure script appears to run ITKR::itkVersion() to find the ITK include directories. It returns 4.11, but all of the files the ITKR installation (which occurred immediately before) are labelled ITK-4.9:

ITKR::itkIncludes() [1] "itkIncludes: itk includes do not exist" /home/adamt/R/x86_64-pc-linux-gnu-library/3.3/ITKR/libs/include/ITK-4.11/> ITKR::itkVersion() [1] "4.11" system("ls /home/adamt/R/x86_64-pc-linux-gnu-library/3.3/ITKR/libs/include/") ITK-4.9

Any ideas on the cause of the mismatch?

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[agt24]

Thanks for the quick reply. Should I fall back to v0.0.1-alpha? Or is there a quicker workaround?

[stnava]

​am updating ants, itkr and antsr to 4.11 now. it may be fixed in latest set of pushes. am testing on osx/linux/travis so we'll see soon.

brian

On Wed, Jul 20, 2016 at 4:15 PM, Adam Thomas notifications@github.com wrote:

Thanks for the quick reply. Should I fall back to v0.0.1-alpha? Or is there a quicker workaround?

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[agt24]

Seems to work now. Thanks.

[muschellij2]

@stnava you can close this.