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APAF-bioinformatics / APAFunctions

R package of all the functions common to APAF's proteomics analysis code. Intended for install_github("APAF-bioinformatics/APAFunctions")
https://apaf-bioinformatics.github.io/APAFunctions/
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createdClusterDendrogram() should be merged with plotColouredDendrogram() #10

Closed keiran-rowell-mq closed 1 year ago

keiran-rowell-mq commented 1 year ago

SWATH.R uses the former, whereas APAFunctions::HClust() uses the later.

Just merge the functionality from SWATH into APAFunctions::HClust(), with exp="SWATH" and plot=TRUE arguments

keiran-rowell-mq commented 1 year ago

These have been merged, but the dendrograms should be written in ggdendro anyway