Metavisitor 2016 11 10

[drosofff]

Almost done with Metavisitor Workflow updates

[drosofff]

The docker image https://hub.docker.com/r/artbio/metavisitor-1.2/ has been successfully tested and upgraded. I'll merge in few hours.

[mvdbeek]

If this is building in a reasonable amount of time (<2h) we can also try again to let this be built by the dockerhub!

[drosofff]

Definitely <2h. I'll time this and let you know. If it fixes something that annoys me, I buy it:

Each time we upload the docker image metavisitor-1.2, we loose the previous one, right. Would not be possible to have a commit track ? Well, I know that the github repo is this track, but it is not as easy for external users of the docker image.

[mvdbeek]

Definitely <2h. I'll time this and let you know. If it fixes something that annoys me, I buy it:

We can just give it a shot (after merging), if it doesn't build, nothing bad happens.

Each time we upload the docker image metavisitor-1.2, we loose the previous one, right. Would not be possible to have a commit track ? Well, I know that the github repo is this track, but it is not as easy for external users of the docker image.

You have to tag them with the commit hash, or the release number. Probably it's best to tag with the release number. (docker tag artbio/metavisitor-1.2:<commit_number>) and then push that as well (which will be fast, since the layers are the same)

[drosofff]

The docker build take 30 min !

[mvdbeek]

The docker build take 30 min !

with most time spent on building trackster, I bet. but that's for the next PR ;). Feel free to merge when ready.

[drosofff]

with most time spent on building trackster

Mmm no. I would say ~20 min for installation of metavisitor tools (sra, blast and trinity are the winners)

[mvdbeek]

right, trackster should be just the base image.

[drosofff]

OK, before merging, artbio/metavisitor-1.2:16_11 is uploaded in docker hub