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ASKCOS / askcos-core

Python package for the ASKCOS platform for prediction of chemical reactivity
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retro transformer.py issue #4

Open ydzdfci opened 2 years ago

ydzdfci commented 2 years ago

I encountered the error message below when I ran transformer.py individually. INFO@retro_transformer : [1.278s] Loading precursor prioritizer for RetroTransformer INFO@pricer : [2.305s] Cannot connect to mongodb to load prices INFO@pricer : [3.839s] Loaded prices from flat file INFO@retro_transformer : [3.846s] Loading fast filter for RetroTransformer INFO@fast_filter : [3.861s] Starting to load fast filter INFO@fast_filter : [5.480s] Done loading fast filter INFO@retro_transformer : [5.497s] Using default clustering for RetroTransformer INFO@pricer : [6.543s] Cannot connect to mongodb to load prices INFO@pricer : [7.897s] Loaded prices from flat file INFO@retro_transformer : [7.913s] Loading retro-synthetic transformer INFO@retro_transformer : [7.928s] reading from file INFO@template_transformer: [7.942s] Loading templates from askcos-core/askcos/data/templates/retro.templates.json.gz INFO@template_transformer: [14.288s] Loaded templates. Using 163723 templates [(1, 'CCOC(=O)[C@H]1CC@@HC@@HN1', 109659, [], 0.0)]

Thanks