AWGL / somatic_db

A database for analysing cancer NGS data within AWMGS
https://awgl.github.io/somatic_db/
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Coverage summary CSV for whole worksheet #110

Closed erikwaskiewicz closed 4 weeks ago

erikwaskiewicz commented 5 months ago

Where there is suboptimal coverage the scientists click into each sample and check the gene coverage to decide if the whole run should be repeated, which takes a while and is clunky

We can add a button to the bottom of the worksheets page to download a CSV for gene coverage of all samples on the worksheet so that it can be checked quickly in future

niamhat commented 4 weeks ago

Closed by https://github.com/AWGL/somatic_db/pull/127