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AbbyCui / CalciumImagingAnalysis

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Implement AUC #4

Closed cawarwick closed 1 year ago

cawarwick commented 1 year ago

Probably want it similar to excel method.

  1. add all frames above a threshold (~0.2-4 or something) during the window
  2. divide it by the time to get a semi-normalized number
  3. maybe implement a rolling average of AUC per minute? Not sure how to window the 4880 responses otherwise
cawarwick commented 1 year ago

This function has been implemented by CAW. other AUC functionality may be already implemented by Abby within Spike Pattern.