Added CSV export of list of max_controls

AbdnBiomechEng / TechForParalysis

Aiming to improve arm function in people with high-level spinal injuries

https://gow.epsrc.ukri.org/NGBOViewGrant.aspx?GrantRef=EP/R035091/2

GNU General Public License v3.0

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Added CSV export of list of max_controls #32

Closed martins055 closed 2 years ago

martins055 commented 2 years ago

'df2' contains a tidied up summary of all the data, and is automatically shown in the terminal when running the script

dblana commented 2 years ago

Hi @martins055 thank you for doing this so quickly! 😃 The csv file doesn't seem to have enough rows - there should be 138 muscle elements in total: I think the supinator and two pronators are missing.

martins055 commented 2 years ago

Added the remaining muscles that weren't processed, scaling them by the average weakness factor as there is no specific testing for them. There are now 138 muscles in the CSV file

dblana commented 2 years ago

One more question 😄: in the ESB abstract, there was a single scaling factor for brachialis, and another for brachioradialis, but it seems here that every element in these muscles has a different factor. Should it not be the same for all elements of a single muscle?

martins055 commented 2 years ago

Correct, in the abstract I took the average value of all the elements of each muscle so that it's readable

I can average the result as well in the output file, though:

it might not be consistent with the optimisation results anymore (would have to add a constraint for that to work out a single factor for all the elements of each muscles - need to give it some thoughts!)
it makes sense to me, physiologically, to keep the elements separated as there's a distributed innervation C5-C6-C7 for these muscles depending on the sources