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Abe404 / root_painter

RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.18387
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Display time remaining for segmentation/extracting length #42

Closed nesod1 closed 2 years ago

nesod1 commented 2 years ago

When segmenting large datasets it would be useful if Rootpainter displayed 'Time remaining' or 'Predicted finish time' displayed as well as the % segmented, especially useful when it takes 24/48 hours to know when to check back!!

Abe404 commented 2 years ago

Good idea! I will have a look into implementing this by measuring the time it took to segment the last 100 images (or however many have been segmented so far, if less than 100). Then I can calculate the estimated remaining time using the total images left to segment (which we already track).

Abe404 commented 2 years ago

This has been implemented in the code but a release has not yet been made available. I will update you when a new client application is available to download. See screenshot for a preview:

Screenshot 2022-09-16 at 14 17 21

I implemented by just getting the time spent processing since the first image was processed and how many images are left to process.

Abe404 commented 2 years ago

will leave open until the release is available.

Abe404 commented 2 years ago

Latest release is now available for download: https://github.com/Abe404/root_painter/releases/tag/0.2.19