Open drinehart1 opened 2 years ago
New addition [by Ed] on brainsharer.org will also help (if not remove need for many users) to easily select brains, annotations, etc. in https://brainsharer.org/create-view
If this allows user to register/login and then open desired data/metadata, impact of never-ending list may be somewhat mitigated
NEEDS (not just list length): align across brains: detected cells, COM, active atlas import
Beth and Marissa to provide more details on search attributes required (by Mon, 19-DEC)
Data types that could be imported to an existing NG session: Atlas reference brain landmarks Brain images - here the brain can be aligned directly to the host brain and or both brains can be aligned to the atlas reference brain Human annotations for host brain and/ or for other brains to include: cell detections, polygons, coms Machine learning annotations for labeled neurons for the host brain and/or other experimental brains
also last but not least- QC for machine annotations- but these should only attach to host brain
Neuron fetch tool filter (id-810, segmentation layer) - can we repurpose to filter annotations?
List is getting too convoluted with each 'save' click (in addition to brains, structures, etc.). Suggestion to make 2 modifications:
1) add sub-menus in dropdown (https://www.w3schools.com/bootstrap/tryit.asp?filename=trybs_ref_js_dropdown_multilevel_css&stacked=h). The categories for principal list should follow most frequently used selections (perhaps sections). I think it also makes since to filter default list to only show annotations for prep_ids currently visible. If new layer is created with additional prep_id, we can modify dropdown
2) Add "advanced search" button to potentially search all indexed categories (just polygons + com), just foundation brains, only from institution X, "recent" (past 14 days), etc. (basically all meta info we capture for animals).