qsignature fails if the snp positions file contains a header.
This has been fine in the past, because we only ever had a single snp positions file.
There is now some work being done to create a GRCh38 version of the snp positions file, and having a header in the file would be very useful.
Type of change
Please delete options that are not relevant.
[X] New feature (non-breaking change which adds functionality)
How Has This Been Tested?
Additional unit tests have been added to test that snp positions files with headers (as well as those without) can be loaded correctly
Additionally, the project was build and run against a production WGS bam file using a snp positions file with headers successfully.
Checklist:
[X] My code follows the style guidelines of this project
[X] I have performed a self-review of my own code
[X] I have commented my code, particularly in hard-to-understand areas
[X] I have made corresponding changes to the documentation
[X] My changes generate no new warnings
[X] I have added tests that prove my fix is effective or that my feature works
[X] New and existing unit tests pass locally with my changes
Description
qsignaturefails if the snp positions file contains a header. This has been fine in the past, because we only ever had a single snp positions file. There is now some work being done to create a GRCh38 version of the snp positions file, and having a header in the file would be very useful.Type of change
Please delete options that are not relevant.
How Has This Been Tested?
Additional unit tests have been added to test that snp positions files with headers (as well as those without) can be loaded correctly Additionally, the project was build and run against a production WGS bam file using a snp positions file with headers successfully.
Checklist: