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Adibvafa / CodonTransformer

CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.
https://adibvafa.github.io/CodonTransformer
Apache License 2.0
82 stars 2 forks source link

Add support for multiple sequence generation #13

Closed Adibvafa closed 2 days ago

Adibvafa commented 2 days ago

Fixes issue #12

codecov-commenter commented 2 days ago

Codecov Report

Attention: Patch coverage is 97.50000% with 1 line in your changes missing coverage. Please review.

Project coverage is 80.45%. Comparing base (cf2f894) to head (34c9c29). Report is 6 commits behind head on main.

Files with missing lines Patch % Lines
CodonTransformer/CodonPrediction.py 92.30% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #13 +/- ## ========================================== + Coverage 79.75% 80.45% +0.70% ========================================== Files 8 8 Lines 805 839 +34 ========================================== + Hits 642 675 +33 - Misses 163 164 +1 ``` | [Flag](https://app.codecov.io/gh/Adibvafa/CodonTransformer/pull/13/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Adibvafa+Fallahpour) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/Adibvafa/CodonTransformer/pull/13/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Adibvafa+Fallahpour) | `80.45% <97.50%> (+0.70%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Adibvafa+Fallahpour#carryforward-flags-in-the-pull-request-comment) to find out more.

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