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AdmiralenOla / Scoary

Pan-genome wide association studies
GNU General Public License v3.0
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Scoary output for phandango #88

Open pavlo888 opened 3 years ago

pavlo888 commented 3 years ago

Hi,

I was wondering if there is any way to incorporate the output from Scoary into phandango for visualization. As far as I understand, phandango requires a Manhattan plot format for GWAS data https://github.com/jameshadfield/phandango/wiki/Input%20data%20formats#manhattan-plots

Any idea on how to proceed.

Thanks!!!

chahatupreti commented 1 year ago

Hello!

Were you able to figure out a solution for your question? I have the same question. Thanks