ODME release version

[jamiecook]

• Squashed ODME

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• rename

• xample notebook

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• Rename

• Select link problem script no longer needed (Issue #493 resolved)

• Rename & add saving stub

• Created saving test

• Removed whitespace

• Rename to avoid name conflict

• Fixed _prepare_execute

• id changed to _id in TrafficClass

• Removed statistics gathering from main class (use the results class for this now)

• Reworked results to have dataframe for links and for iterations

• Fixed bugs in last commit

• Fixed bug in test where wrong name used for assignment results

• Deleted redundant script (this is now a test)

• Updated results to allow for empty dataframe return if no execution

• Updated final script - results still not fully working and saving requires more testing.

• Fixed bug where results were being suppressed by incorrect if/else order

• Changed comment

• updated comment

• Finished clean up of ODME main class, 3 TODO's remaining until this class is completed fully.

• Same as last commit (forgot to do extra part of commit)

• made pytlint happier

• ODMEResults class cleaned up - no TODO's remaining here.

• Cleaned up ScalingFactors - 6 todo's 5 of which are referencing.

• Added in-text citations to Spiess

• make pylint happy

• pushing stuff

• add support for json report on matrices

• run black linter

• Removed Todo

• Tidied up example usage doc

• Scripts Finalised

• Dealt with multi-class objective function pce

• Removed comment

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• Finished all plot generation and scripts

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• Rename file

• Updated example doc & deleted scripts

• Added matrix_estimation.rst file

• Partially updated .rst file

• more writing

• 3 sections unfinished

• Updated example script

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• Edited overview

• Finished Execution block

• Results block finished

• Completed

• Update docs/source/examples/full_workflows/plot_matrix_estimation.py

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