Update use of read groups - Githubissues

AfshinLab / BLR

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Update use of read groups #70

Open pontushojer opened 1 year ago

pontushojer commented 1 year ago

Only the identifier part of read-groups configurable and some parts are not used as intended (see GATK guidelines).

Make configurable:

sample (SM)
library (LB) (currently use for storing library_type information, should be used to signal reruns of the same sample)

Issue copied from https://github.com/FrickTobias/BLR/issues/239