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AgResearch / gbs_prism

refactored GBS processing
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delete run fails #25

Closed afmcc closed 4 years ago

afmcc commented 4 years ago

psql:/tmp/delete_191025_D00390_0511_BCE3UUANXX.psql:31: ERROR: update or delete on table "biosampleob" violates foreign key constraint "gbs_sampleid_history_fact_biosampleob_fkey" on table "gbs_sampleid_history_fact" DETAIL: Key (obid)=(83804568) is still referenced from table "gbs_sampleid_history_fact".

afmcc commented 4 years ago

when patching this, also add feedback msg suggesting delete of GBS, bcl2fastq and fastq-link-farm entries

afmcc commented 4 years ago

fixed ( https://github.com/AgResearch/gbs_prism/commit/512026d37349e7ab84d1e8663fa36aa9c75a8a27 )