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AlanRace / imzMLConverter

Tool for converting mass spectrometry data to the imzML format.
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Got problem installation imzMLConverter #3

Closed weantony closed 2 years ago

weantony commented 4 years ago

Got following problem after double double clicking run.bat or command line. Anyone seen it before. JDK have been installed and re-installed. Attempts have been tries on win7sp1pro and win10. Outcomes are the same.

F:\OneDrive****\imzML convertor\imzMLConverter_1.3>java -jar -Xmx1024m imzMLConverter.jar Exception in thread "main" java.lang.RuntimeException: Unable to add the swt jar to the class path: F:\OneDrive\study material\Queens Taskforce\sciex staff\imzML convertor\imzMLConverter_1.3\swt\org.eclipse.swt.win32.win32.x86_64-4.3.jar at imzMLConverter.gui.SWTLoader.loadSwtJar(SWTLoader.java:76) at imzMLConverter.gui.SWTLoader.(SWTLoader.java:11) at imzMLConverter.gui.SWTLoader.main(SWTLoader.java:18) Caused by: java.lang.ClassCastException: class jdk.internal.loader.ClassLoaders$AppClassLoader cannot be cast to class java.net.URLClassLoader (jdk.internal.loader.ClassLoaders$AppClassLoader and java.net.URLClassLoader are in module java.base of loader 'bootstrap') at imzMLConverter.gui.SWTLoader.loadSwtJar(SWTLoader.java:68) ... 2 more

AlanRace commented 2 years ago

I am not sure whether this issue is still relevant (I apologise for the delay), but could you let me know which OS and Java versions you are/were running?

P.S. version 1.3 is an old version of the converter - the newer versions available on this repository shouldn't suffer from this issue.

weantony commented 2 years ago

I am not sure whether this issue is still relevant (I apologise for the delay), but could you let me know which OS and Java versions you are/were running?

P.S. version 1.3 is an old version of the converter - the newer versions available on this repository shouldn't suffer from this issue.

Hi Alan,

Thank you very much for your reply. The problem has been resolved already.

Best Regards, Jian