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AlanRace / imzMLConverter

Tool for converting mass spectrometry data to the imzML format.
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how to convert Multiple file to one imzML file #6

Open lujw666 opened 3 years ago

lujw666 commented 3 years ago

docker run -it --rm -v /path:/mydata alanrace/imzmlconverter:latest jimzMLConverter imzML /mydata/*.raw -c 10 10 -c how to combine file,the parameter how to fill in。

this error Feb 24, 2021 1:01:05 AM com.alanmrace.jimzmlparser.obo.OBOTerm parse INFO: Unknown value-type encountered 'value-type:xsd\:dateTime "The allowed value-type for this CV term."' @ MS:1000747 Feb 24, 2021 1:01:05 AM com.alanmrace.jimzmlparser.obo.OBOTerm parse INFO: Unknown value-type encountered 'value-type:xsd\:dateTime "The allowed value-type for this CV term."' @ MS:1002435

AlanRace commented 3 years ago

Hello, These are just information notices, they aren't errors that will affect the conversion. What type of raw files are you trying to combine?

Thanks,

Alan

lujw666 commented 3 years ago

Thank，if I have 10 .raw file ,I want convert .raw file to imzML and combine 10 .imzML file to one.jimzMLConverter just convert .raw file to imzML,not combine.