AlejandraArnedo / Wound-healing-size-tool

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problem when 2 gap #10

Open yozakine opened 1 year ago

yozakine commented 1 year ago

hi, first of all thanks for your awesome tool, i'm trying to use it to get an area of a scratch for a stack of image, at first it work well but when the hound start to heal the tool detect the biggest gap but i also want to take in consideration the other gap, is there a way to do it ? Thanks in advance for your future answer.

AlejandraArnedo commented 1 year ago

Hi,

Could you provide me with more information? Why do you want to account for additional ROI? If you have over-segmentation you can change the initial parameters and review Figures S2 and S3.https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0232565&fbclid=IwAR3bmDEPWiHgu [https://journals.plos.org/plosone/article/figure/image?id=10.1371/journal.pone.0232565.g006&size=inline]https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0232565&fbclid=IwAR3bmDEPWiHgu An image J plugin for the high throughput image analysis of in vitro scratch wound healing assayshttps://journals.plos.org/plosone/article?id=10.1371/journal.pone.0232565&fbclid=IwAR3bmDEPWiHgu journals.plos.org Let me know if you have any questions.

Alejandra


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hi, first of all thanks for your awesome tool, i'm trying to use it to get an area of a scratch for a stack of image, at first it work well but when the hound start to heal the tool detect the biggest gap but i also want to take in consideration the other gap, is there a way to do it ? Thanks in advance for your future answer.

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