search

AlessioMilanese / classify-genomes

Classify a genome sequence according to the mOTUs/specI taxonomy
7 stars 2 forks source link

runs to states "extract genes" with no output #2

Closed raw937 closed 5 years ago

raw937 commented 5 years ago

?

AlessioMilanese commented 5 years ago

There are many dependencies:

I would use conda for the dependencies:

cd classify-genomes/env
conda env create -f classify-genomes.yaml
source activate classify-genomes-ENV

Do you have conda installed already? If not, on linux you can install with:

curl -O https://repo.continuum.io/archive/Anaconda3-5.0.1-Linux-x86_64.sh
bash Anaconda3-5.0.1-Linux-x86_64.sh

or check:https://www.digitalocean.com/community/tutorials/how-to-install-the-anaconda-python-distribution-on-ubuntu-16-04