What version of IMGT/HLA database is being used?

AlexanderDilthey / MHC-PRG

Population Reference Graphs for the HLA and MHC.

GNU General Public License v3.0

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What version of IMGT/HLA database is being used? #23

Open seqlee opened 7 years ago

seqlee commented 7 years ago

Hi,

I am testing HLAPRG for benchmarking and I noticed your hla_nom_g file is from 3.24.0 release however, your rearragned files containing allele sequences (mostly contained in tmp2/GS_nextGen/hla ?) are missing some alleles. My guess is that HLAPRG actually uses earlier release than 3.24.0. If so, what version is it? Thank you!

DarioS commented 7 years ago

I hope this software will still be maintained. A lot of them aren't after they are published in a journal.

AlexanderDilthey commented 7 years ago

Yes, it will still be maintained! In fact I am currently in this process of rolling this out: https://github.com/AlexanderDilthey/HLA-PRG-LA