Subset the requirement and testing in Snakefile to separate scripts

AlexanderLabWHOI / eukrhythmic

A metatranscriptomic pipeline optimized for the study of microeukaryotes.

MIT License

15 stars 3 forks source link

Subset the requirement and testing in Snakefile to separate scripts #14

Closed halexand closed 4 years ago

halexand commented 4 years ago

[x] Move the chunks of code that are doing the checking on input information from the user into separate scripts.
[x] Add print statements that state steps in checks (e.g. reading file list, checking paired reads, printing the sample names that will be used).

akrinos commented 4 years ago

Added two separate scripts to be executed within scripts/ directory. Added space these print statements, which can be expanded/updated in the future.