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AlexanderLabWHOI
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eukrhythmic
A metatranscriptomic pipeline optimized for the study of microeukaryotes.
MIT License
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Spark Plugs
#74
Open
halexand
opened
1 year ago
halexand
commented
1 year ago
Use cases for parsing massive amounts of data:
Return summed taxonomic distribution of reads at multiple levels (domain, family, etc.)
Return summed functional distribution (KOs, Pfam, etc.)
Return taxonomy (at given level) x functional distribution (KOs)
Return all individual contigs + annotation for a given taxonomic group provided by the user
halexand
commented
1 year ago
@shu251 @akrinos
Use cases for parsing massive amounts of data: