Random version-ing issues

AlexanderLabWHOI / eukrhythmic

A metatranscriptomic pipeline optimized for the study of microeukaryotes.

MIT License

15 stars 3 forks source link

Random version-ing issues #79

Open halexand opened 1 week ago

halexand commented 1 week ago

Just finished working through some install and running issues and noted some changes that we should make to the environment.yaml file:

Current format of eukrhythmic needs to be snakemake < 8 so we should add that to the install.
Biopython is required but missing from the environment file
had syntax errors with python with version 3.12 but works with 3.11.3... not sure why.

akrinos commented 1 week ago

@halexand can you post the syntax errors you got with 3.12?

halexand commented 1 week ago

Yep, python version was 3.12.7 and error was:

akrinos commented 1 week ago

That is interesting that 3.11.3 is not enforcing that error, as generally that is a Python syntax requirement! I just got rid of the rogue space after line continuation.