What scientific question is your analysis addressing?
AS noticed by @runjin326 here, the readme for the EPN subtyping module does not match the code as implemented in the module, in particular the list of prioritized fusions.
What was your approach?
Updated the table!
What GitHub issue does your pull request address?
NA
Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.
Which areas should receive a particularly close look?
This is a documentation-only change, so unless the code should be updated instead of the readme (i.e. if the readme was correct, and the code wrong), this should be straightforward.
Purpose/implementation Section
What scientific question is your analysis addressing?
AS noticed by @runjin326 here, the readme for the EPN subtyping module does not match the code as implemented in the module, in particular the list of prioritized fusions.
What was your approach?
Updated the table!
What GitHub issue does your pull request address?
NA
Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.
Which areas should receive a particularly close look?
This is a documentation-only change, so unless the code should be updated instead of the readme (i.e. if the readme was correct, and the code wrong), this should be straightforward.
The relevant code is here: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/master/analyses/molecular-subtyping-EPN/03-subgrouping_samples.ipynb