AlexsLemonade / OpenPBTA-analysis

The analysis repository for the Open Pediatric Brain Tumor Atlas Project
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Create additional panels for Figure S3 #1255

Closed jharenza closed 2 years ago

jharenza commented 2 years ago

Only the primary_only_other_supplemental_oncoprint.pdf panel is represented here, so the two CN landscape and chromothripsis panels should be added per the slide deck here.

Figures used for panels can be found:

Who will complete this? @sjspielman ?

sjspielman commented 2 years ago

Yup, I got it!

sjspielman commented 2 years ago

I've tracked down panel B here. It was last run with v20, so we might want to update. - https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/master/analyses/cnv-chrom-plot/plots/cn_status_heatmap.png

sjspielman commented 2 years ago

Closed by #1259