From this comment, we should update the GSVA analysis to consider cancer_group instead of broad_histology as the sample group variable. This requires both updating the module to update results, and update the code in figures/scripts/fig5-panels-gsva-umap.R that makes the associated manuscript figure.
From this comment, we should update the GSVA analysis to consider
cancer_groupinstead ofbroad_histologyas the sample group variable. This requires both updating the module to update results, and update the code infigures/scripts/fig5-panels-gsva-umap.Rthat makes the associated manuscript figure.