AlexsLemonade / OpenPBTA-analysis

The analysis repository for the Open Pediatric Brain Tumor Atlas Project
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rerun chordoma subtyping (4 of N) #1379

Closed jharenza closed 2 years ago

jharenza commented 2 years ago

Purpose/implementation Section

What scientific question is your analysis addressing?

rerun chordoma subtyping

What was your approach?

What GitHub issue does your pull request address?

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Is there anything that you want to discuss further?

Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?

Results

What types of results are included (e.g., table, figure)?

What is your summary of the results?

no notable changes

Reproducibility Checklist

Documentation Checklist

jaclyn-taroni commented 2 years ago

Hm, so I think this should get rerun to reflect the expression value changes in the module but I don't think it needs to be done here in this stack. I will close.

jaclyn-taroni commented 2 years ago

Okay, I've rerun this in a separate branch and it seems like the differences in expression that I perceived were a matter of aspect ratio of the figure.