v23 create ci testing files - Githubissues

AlexsLemonade / OpenPBTA-analysis

The analysis repository for the Open Pediatric Brain Tumor Atlas Project

Other

100 stars 67 forks source link

v23 create ci testing files #1644

Closed jharenza closed 1 year ago

jharenza commented 1 year ago

Purpose/implementation Section

What scientific question is your analysis addressing?

Create v23 testing files

What was your approach?

Updated release, ran module, updated files on S3 in testing folder. V22 testing folders are now in a backup folder.

What GitHub issue does your pull request address?

Revisions, release v23

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Is there anything that you want to discuss further?

@jaclyn-taroni can you push rerun on the open release PRs? I don't have permissions to do so.

Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?

Yes

Results

What types of results are included (e.g., table, figure)?

New biospecimen ID selection files, updated subset files

What is your summary of the results?

Reproducibility Checklist

[x] The dependencies required to run the code in this pull request have been added to the project Dockerfile.
[x] This analysis has been added to continuous integration.

Documentation Checklist

[x] This analysis module has a README and it is up to date.
[x] This analysis is recorded in the table in analyses/README.md and the entry is up to date.
[x] The analytical code is documented and contains comments.