Closed sjspielman closed 1 year ago
From #1691, we're going to be updating Figure S7 with some new panels. This issue will track this panel:
(C) the UMAP plot highlighting sequencing center: https://alexslemonade.github.io/OpenPBTA-analysis/analyses/transcriptomic-dimension-reduction/04-explore-sequencing-center-effects.nb.html#cancer_group_umap
This panel already was made in the linked notebook above, so the steps that need to happen here are:
figures/generate-figures.sh
From #1691, we're going to be updating Figure S7 with some new panels. This issue will track this panel:
This panel already was made in the linked notebook above, so the steps that need to happen here are:
figures/generate-figures.shto copy it over: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/627ec427ad0a8d9d913e614c9db50546c56d8283/figures/generate-figures.sh#L188-L210