AlexsLemonade / OpenPBTA-analysis

The analysis repository for the Open Pediatric Brain Tumor Atlas Project
Other
100 stars 67 forks source link

Fix polya/stranded barplot #1703

Closed sjspielman closed 1 year ago

sjspielman commented 1 year ago

Closes #1701

This PR fixes a bug caught by @jharenza (🎉 🙏 ) where we had some wrong samples in a plot, because sample_id needed to be used for filtering out duplicates. Code and plot fixed - you can see MB is non-0 now: https://github.com/AlexsLemonade/OpenPBTA-analysis/blob/eb94929ba90cf6ecdf6a80800d129efac4c18fb6/figures/pdfs/supp/figs7/panels/RNA_library_barplot.pdf