In preparation for running workflows without internet access, we need a fully enclosed Vireo image, which did not exist. This PR creates one that is ready for use by Nextflow.
I tried to keep the package as small as I could, using a slim python base, rather than the conda base I had used previously, but that ended up meaning I needed to install ps as well as nextflow needed it.
The README is brief, but does include the fact that the image should be built as an amd64, which is not the default on an M1 mac. I decided for this use case not to get into multi-platform builds.
In preparation for running workflows without internet access, we need a fully enclosed Vireo image, which did not exist. This PR creates one that is ready for use by Nextflow.
I tried to keep the package as small as I could, using a slim python base, rather than the conda base I had used previously, but that ended up meaning I needed to install
psas well as nextflow needed it.The README is brief, but does include the fact that the image should be built as an
amd64, which is not the default on an M1 mac. I decided for this use case not to get into multi-platform builds.