AlexsLemonade / alsf-scpca

Management and analysis tools for ALSF Single-cell Pediatric Cancer Atlas data.
BSD 3-Clause "New" or "Revised" License
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Use named instance types for batch #183

Closed jashapiro closed 4 months ago

jashapiro commented 4 months ago

Here I am switching from using the "optimal" instances, which are all 4-series, to named instance types for our batch compute environments. This is related to https://github.com/AlexsLemonade/scpca-nf/issues/709 where we may need more memory than available in the R4 instances.

I also switched to the new SPOT_PRICE_CAPACITY_OPTIMIZED allocation strategy where applicable, because that might control costs a bit better, especially given the fact that we are now allowing more expensive instance types.

I wasn't sure whether it was worth including both Intel and AMD instance types, but it doesn't seem like it should hurt?

I have not yet applied this change; I am waiting for review of my choices here.