AlexsLemonade / refinebio-examples

Example workflows for refine.bio data
https://www.refine.bio
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Polish microarray GSVA example #440

Closed jaclyn-taroni closed 3 years ago

jaclyn-taroni commented 3 years ago

Purpose

Polishing the microarray GSVA example.

Issue addressed

For the microarray GSVA example, the following are being addressed:

Comments/questions for the reviewer

Outside of copying over some of the changes to the microarray differential expression example with more than 2 groups (#427), I have not done much with the limma section.

jaclyn-taroni commented 3 years ago

I like the de-messy-ing of the design matrix column names. Good call.

Can't take credit for this, all @jashapiro on #427!