Publish all current staging branch changes - Githubissues

AlexsLemonade / refinebio-examples

Example workflows for refine.bio data

https://www.refine.bio

Other

10 stars 5 forks source link

Publish all current staging branch changes #442

Closed cansavvy closed 3 years ago

cansavvy commented 3 years ago

Changes Being Published

We're publishing everything that's in staging. This is mostly polishing PRs #289 and #290, but also includes adding the RNA-seq pathway analyses.

This will close #390 and #391

List of Commits/PR's Included

Highlights are that the RNA-seq pathway analyses have been added:

394 #395 - ORA for RNA-seq
405 #408 - GSEA for RNA-seq
403 #404 - GSVA for RNA-seq

And the rest are a lot of polishing PRs as well as "make github louder" PR.

Link to html Preview

For reviewing purposes, you can take a browse through htmlpreview: http://htmlpreview.github.io/?https://github.com/AlexsLemonade/refinebio-examples/gh-pages-stages/01-getting-started/getting-started.html

Effectively every html has had some changes at this point.

Publishing Checklist:

[x] Does everything look good using html preview -- having taken a particularly close look at any new html files?
[x] Have any new examples been added to the refinebio-examples feedback survey? Ideally, don't click publish until this PR is merged (changes are autosaved).

Survey is updated but not published yet.

cansavvy commented 3 years ago

👍 I don't think we're going to be able to go through HTML preview thoroughly during review. I think we're better served by getting this merged and then filing individual issues (or PRs) as we find issues.

Makes sense to me.