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AlexsLemonade / refinebio

Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.
https://www.refine.bio/
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Dataset Request GSE126205 #2315

Closed wvauclain closed 4 years ago

wvauclain commented 4 years ago

Context

A user submitted a dataset request for GSE126205, which is this experiment.

Problem or idea

We haven't actually surveyed GSE126205 yet.

Solution or next step

Maybe we just haven't gotten to it? I will take a look and make sure that it is an experiment we can survey.

wvauclain commented 4 years ago

I tried running the foreman locally, and it silently does nothing then returns a successful error code. This looks like a bug in our surveyor.

wvauclain commented 4 years ago

We have surveyed this dataset under its SRA accession SRP184464.

jaclyn-taroni commented 4 years ago

I can notify the user that the dataset is available here: https://www.refine.bio/experiments/SRP184464/pdgfra-and-asma-mark-two-distinct-mesenchymal-cell-populations-involved-in-parenchymal-and-vascular-remodeling-in-pulmonary-fibrosis

jaclyn-taroni commented 4 years ago

Notification sent. Closing this!