AlexsLemonade / refinebio

Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.
https://www.refine.bio/
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Check processing success rate with new RNA-seq supported platforms #3282

Open davidsmejia opened 1 year ago

davidsmejia commented 1 year ago

Context

We have added some new platforms in #3281 and we should confirm that processing samples from these platforms do not error out at an exceeding rate. I do not expect this to be the case but I am making this ticket just to make sure we do check.

Problem or idea

After merging in #3281 we should wait some time to collect a history of processing success / failure. Then we should confirm that these platforms have a success rate similar to existing supported RNA-seq platforms.

Solution or next step

I will set a reminder for a few weeks after this is merged into production to pick up this ticket. I expect the easiest way to approach this problem will be to use the API or to create a management command that allows us to quickly get success rate for a specific platform.