Update Github workflows config - Githubissues

AlexsLemonade / refinebio

Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.

https://www.refine.bio/

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Update Github workflows config #3290

Closed arkid15r closed 1 year ago

arkid15r commented 1 year ago

Issue Number

Resolves #3289

Purpose/Implementation Notes

The main purpose of the PR is to introduce Docker base image CI/CD step. Other notable changes include:

Add common Dockerfile.base image job
Add dependencies: syntax check -> base image -> test jobs
Migrate to pre-commit actions
Add and title-case job/step names
Group and reorder jobs

Checklist

[x] Lint and unit tests pass locally with my changes
[ ] I have added tests that prove my fix is effective or that my feature works
[ ] I have added necessary documentation (if appropriate)
[ ] Any dependent changes have been merged and published in downstream modules