Fix no-op tests - Githubissues

AlexsLemonade / refinebio

Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.

https://www.refine.bio/

Other

125 stars 18 forks source link

Fix no-op tests #3446

Closed arkid15r closed 8 months ago

arkid15r commented 8 months ago

Issue Number

Resolves #3436

Purpose/Implementation Notes

Fix no-op tests

Use wget instead of curl for gene index downloads
Set specific unzip/rm file instructions
Set pre-commit to use Python 3.11

Types of changes

Bugfix (non-breaking change which fixes an issue)

Checklist

[x] Lint and unit tests pass locally with my changes
[ ] I have added tests that prove my fix is effective or that my feature works
[ ] I have added necessary documentation (if appropriate)
[ ] Any dependent changes have been merged and published in downstream modules

davidsmejia commented 8 months ago

I'll close my PRs this looks good to me!