AlexsLemonade / scpca-docs

User information about ScPCA processing
https://scpca.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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Add sample_type metadata #253

Closed sjspielman closed 9 months ago

sjspielman commented 9 months ago

Closes #252

Here, I'm adding sample_type to the file content descriptions metadata sections. I realize also that I have a VS Code plugin for working with markdown tables that changed up the spacing a bit, so as a consequence the whole tables are showing a diff!

But I really only changed (added) 1 line! I added it right after sample_metadata, which corresponds to where it gets added in the workflow.

| `sample_type`   | A string indicating the type of sample, with one of the following values: `"patient-derived xenograft"`, `"cell line"`, or `"patient tissue"`. If the library is multiplexed, this will be a named vector giving the sample type for each sample ID in the object   |

After this goes into development, I'm going to cherry-pick into #223