AlexsLemonade / scpca-docs

User information about ScPCA processing
https://scpca.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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Update docs to account for new folder name for downloads #339

Closed allyhawkins closed 3 months ago

allyhawkins commented 4 months ago

In looking at the most recent data upload, I noticed that the folder name for downloads does not quite match what's in the docs. In general the folder name has the following format: ID_MODALITY_FORMAT_DATE, for example SCPCS000001_SINGLE-CELL_SINGLE-CELL-EXPERIMENT_DATE.

We need to update the images in the download files section to include this new format for the folder name. Tagging @dvenprasad to help with creating the updated images.

I don't believe there are any text changes for this, just image changes.

@davidsmejia is also going to update the folder names on the Portal so that they have _ to separate sample, modality, format, and date but - to separate the words like single-cell and single-cell-experiment.

jaclyn-taroni commented 4 months ago

I would expect the CHANGELOG text to report this change.

davidsmejia commented 3 months ago

Link to the updated outputs here for reference:

https://github.com/AlexsLemonade/scpca-portal/pull/845#issuecomment-2285032492

dvenprasad commented 3 months ago

@jaclyn-taroni lmk if you need anything else or need me to tweak anything.

AnnData CITE-seq Sample anndata-CITE-seq-sample-download-folder

AnnData Project anndata-project-download-folder

AnnData Sample anndata-sample-download-folder

AnnData Merged CITE-seq Project merged-anndata-cite-seq-project-download-folder

AnnData Merged Project merged-anndata-project-download-folder

SCE Merged Project merged-sc-project-download-folder

SCE Multiplexed Project multiplexed-download-folder

SCE Project sc-project-download-folder

SCE Sample sc-sample-download-folder

SCE Spatial spatial-download-folder

jashapiro commented 3 months ago

I would expect ANNDATA to be one word? Obviously we want to match the actual download, so I don't know where this change would show up...

jaclyn-taroni commented 3 months ago

That's a later conversation, @jashapiro, not a today conversation.