AlexsLemonade / scpca-nf

scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data
BSD 3-Clause "New" or "Revised" License
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QC report aesthetic updates #689

Closed sjspielman closed 9 months ago

sjspielman commented 9 months ago

Closes #618 Closes #620

This PR makes two viz changes to the QC report:

Let me know what you think of sizing choices!

qc_reports_cell_counts.zip

sjspielman commented 9 months ago

I played around with a couple different SCEs looking at a 2000 vs 2500 cutoff, and honestly it all looked fairly similar to me so i went with a 2250 cutoff 😂 . I wrote this up into a function in a new utils file which is now "sourced" in both the main and supplemental cell type report.