In reviewing the sample metadata, we noticed that the bulk metadata and sample metadata is not in the same order. We have some overlapping columns that are present in both, but in a different order. Although this isn't entirely necessary, it might be a good idea to adjust the order to match what's in https://github.com/AlexsLemonade/scpca-portal/issues/699#issuecomment-2140625806.
This should be pretty straight forward with some minor edits to generate_bulk_metadata.R to make sure the output TSV has columns in the correct order.
In reviewing the sample metadata, we noticed that the bulk metadata and sample metadata is not in the same order. We have some overlapping columns that are present in both, but in a different order. Although this isn't entirely necessary, it might be a good idea to adjust the order to match what's in https://github.com/AlexsLemonade/scpca-portal/issues/699#issuecomment-2140625806.
This should be pretty straight forward with some minor edits to generate_bulk_metadata.R to make sure the output TSV has columns in the correct order.
This should be: